3D structure

PDB id
6ORL (explore in PDB, NAKB, or RNA 3D Hub)
Description
RF1 pre-accommodated 70S complex at 24 ms
Experimental method
ELECTRON MICROSCOPY
Resolution
3.5 Å

Loop

Sequence
GAAGGCCCAGACAG*UCGAGUCGGC
Length
24 nucleotides
Bulged bases
6ORL|1|1|A|1046
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

6ORL|1|1|G|1038
6ORL|1|1|A|1039
6ORL|1|1|A|1040
6ORL|1|1|G|1041
6ORL|1|1|G|1042
6ORL|1|1|C|1043
6ORL|1|1|C|1044
6ORL|1|1|C|1045
6ORL|1|1|A|1046
6ORL|1|1|G|1047
6ORL|1|1|A|1048
6ORL|1|1|C|1049
6ORL|1|1|A|1050
6ORL|1|1|G|1051
*
6ORL|1|1|U|1108
6ORL|1|1|C|1109
6ORL|1|1|G|1110
6ORL|1|1|A|1111
6ORL|1|1|G|1112
6ORL|1|1|U|1113
6ORL|1|1|C|1114
6ORL|1|1|G|1115
6ORL|1|1|G|1116
6ORL|1|1|C|1117

Current chains

Chain 1
23S ribosomal RNA

Nearby chains

Chain F
50S ribosomal protein L6
Chain M
50S ribosomal protein L16
Chain V
50S ribosomal protein L25
Chain f
50S ribosomal protein L36

Coloring options:

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