IL_6ORL_207

3D structure

PDB id

6ORL (explore in PDB, NAKB, or RNA 3D Hub)

Description

RF1 pre-accommodated 70S complex at 24 ms

Experimental method

ELECTRON MICROSCOPY

Resolution

3.5 Å

Loop

Sequence

GCCUUGAUGUGUAGGAUAGGUG*CACCCUUUAAUGU

Length

35 nucleotides

Bulged bases

6ORL|1|1|U|2111, 6ORL|1|1|G|2112, 6ORL|1|1|G|2115, 6ORL|1|1|U|2118

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6ORL|1|1|G|2102
6ORL|1|1|C|2103
6ORL|1|1|C|2104
6ORL|1|1|U|2105
6ORL|1|1|U|2106
6ORL|1|1|G|2107
6ORL|1|1|A|2108
6ORL|1|1|U|2109
6ORL|1|1|G|2110
6ORL|1|1|U|2111
6ORL|1|1|G|2112
6ORL|1|1|U|2113
6ORL|1|1|A|2114
6ORL|1|1|G|2115
6ORL|1|1|G|2116
6ORL|1|1|A|2117
6ORL|1|1|U|2118
6ORL|1|1|A|2119
6ORL|1|1|G|2120
6ORL|1|1|G|2121
6ORL|1|1|U|2122
6ORL|1|1|G|2123
*
6ORL|1|1|C|2175
6ORL|1|1|A|2176
6ORL|1|1|C|2177
6ORL|1|1|C|2178
6ORL|1|1|C|2179
6ORL|1|1|U|2180
6ORL|1|1|U|2181
6ORL|1|1|U|2182
6ORL|1|1|A|2183
6ORL|1|1|A|2184
6ORL|1|1|U|2185
6ORL|1|1|G|2186
6ORL|1|1|U|2187

Current chains

Chain 1

23S ribosomal RNA

Nearby chains