IL_6OSI_012

3D structure

PDB id

6OSI (explore in PDB, NAKB, or RNA 3D Hub)

Description

Unmodified tRNA(Pro) bound to Thermus thermophilus 70S (near cognate)

Experimental method

X-RAY DIFFRACTION

Resolution

4.14 Å

Loop

Sequence

CGC*GUG

Length

6 nucleotides

Bulged bases

None detected

QA status

Self-complementary:

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_6OSI_012 not in the Motif Atlas

Geometric match to IL_6OL3_002

Geometric discrepancy: 0.2205

The information below is about IL_6OL3_002

Detailed Annotation

Isolated non-canonical cWW pair

Broad Annotation

No text annotation

Motif group

IL_87907.2

Basepair signature

cWW-cWW-cWW

Number of instances in this motif group

179

Unit IDs

6OSI|1|QA|C|186|||C
6OSI|1|QA|G|186|||D
6OSI|1|QA|C|186|||E
*
6OSI|1|QA|G|186|||N
6OSI|1|QA|U|186|||O
6OSI|1|QA|G|186|||P

Current chains

Chain QA

16S rRNA

Nearby chains

Chain QT

30S ribosomal protein S20