IL_6OSI_187

3D structure

PDB id

6OSI (explore in PDB, NAKB, or RNA 3D Hub)

Description

Unmodified tRNA(Pro) bound to Thermus thermophilus 70S (near cognate)

Experimental method

X-RAY DIFFRACTION

Resolution

4.14 Å

Loop

Sequence

GCAAU*AC

Length

7 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_6OSI_187 not in the Motif Atlas

Geometric match to IL_6CZR_127

Geometric discrepancy: 0.2249

The information below is about IL_6CZR_127

Detailed Annotation

C-loop

Broad Annotation

No text annotation

Motif group

IL_03109.2

Basepair signature

cWW-cSH-cWS-tWH-cWW

Number of instances in this motif group

5

Unit IDs

6OSI|1|XA|G|371
6OSI|1|XA|C|372
6OSI|1|XA|A|373
6OSI|1|XA|A|374
6OSI|1|XA|U|375
*
6OSI|1|XA|A|389
6OSI|1|XA|C|390

Current chains

Chain XA

16S rRNA

Nearby chains

Chain XP

30S ribosomal protein S16