IL_6OSI_222

3D structure

PDB id

6OSI (explore in PDB, NAKB, or RNA 3D Hub)

Description

Unmodified tRNA(Pro) bound to Thermus thermophilus 70S (near cognate)

Experimental method

X-RAY DIFFRACTION

Resolution

4.14 Å

Loop

Sequence

GUC*GUC

Length

6 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_6OSI_222 not in the Motif Atlas

Geometric match to IL_5J7L_050

Geometric discrepancy: 0.3858

The information below is about IL_5J7L_050

Detailed Annotation

Isolated non-canonical cWW pair

Broad Annotation

No text annotation

Motif group

IL_28037.2

Basepair signature

cWW-cWW-cWW

Number of instances in this motif group

65

Unit IDs

6OSI|1|XA|G|1405
6OSI|1|XA|U|1406
6OSI|1|XA|C|1407
*
6OSI|1|XA|G|1494
6OSI|1|XA|U|1495
6OSI|1|XA|C|1496

Current chains

Chain XA

16S rRNA

Nearby chains

Chain YA

Large subunit ribosomal RNA; LSU rRNA