IL_6OSI_364

3D structure

PDB id

6OSI (explore in PDB, NAKB, or RNA 3D Hub)

Description

Unmodified tRNA(Pro) bound to Thermus thermophilus 70S (near cognate)

Experimental method

X-RAY DIFFRACTION

Resolution

4.14 Å

Loop

Sequence

CCAC*GGAG

Length

8 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_6OSI_364 not in the Motif Atlas

Homologous match to IL_4LFB_067

Geometric discrepancy: 0.2085

The information below is about IL_4LFB_067

Detailed Annotation

Double sheared

Broad Annotation

Double sheared

Motif group

IL_09705.15

Basepair signature

cWW-tSH-tHS-cWW

Number of instances in this motif group

34

Unit IDs

6OSI|1|XA|C|1259
6OSI|1|XA|C|1260
6OSI|1|XA|A|1261
6OSI|1|XA|C|1262
*
6OSI|1|XA|G|1273
6OSI|1|XA|G|1274
6OSI|1|XA|A|1275
6OSI|1|XA|G|1276

Current chains

Chain XA

16S rRNA

Nearby chains

Chain XU

30S ribosomal protein Thx