IL_6OSK_009

3D structure

PDB id

6OSK (explore in PDB, NAKB, or RNA 3D Hub)

Description

RF1 accommodated 70S complex at 60 ms

Experimental method

ELECTRON MICROSCOPY

Resolution

3.6 Å

Loop

Sequence

CCUGAAUC*GUGAG

Length

13 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_6OSK_009 not in the Motif Atlas

Homologous match to IL_5J7L_253

Geometric discrepancy: 0.3626

The information below is about IL_5J7L_253

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_77870.1

Basepair signature

cWW-L-R-L-tHS-L-cWW-L-cWW

Number of instances in this motif group

2

Unit IDs

6OSK|1|1|C|274
6OSK|1|1|C|275
6OSK|1|1|U|276
6OSK|1|1|G|277
6OSK|1|1|A|278
6OSK|1|1|A|279
6OSK|1|1|U|280
6OSK|1|1|C|281
*
6OSK|1|1|G|359
6OSK|1|1|U|360
6OSK|1|1|G|361
6OSK|1|1|A|362
6OSK|1|1|G|363

Current chains

Chain 1

23S ribosomal RNA

Nearby chains