IL_6OSK_055

3D structure

PDB id

6OSK (explore in PDB, NAKB, or RNA 3D Hub)

Description

RF1 accommodated 70S complex at 60 ms

Experimental method

ELECTRON MICROSCOPY

Resolution

3.6 Å

Loop

Sequence

UGUAGG*CUGAGG

Length

12 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_6OSK_055 not in the Motif Atlas

Geometric match to IL_8ZA4_003

Geometric discrepancy: 0.3254

The information below is about IL_8ZA4_003

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_35186.1

Basepair signature

cWW-L-R-L-R-L-R-cWW-cWW

Number of instances in this motif group

4

Unit IDs

6OSK|1|1|U|1474
6OSK|1|1|G|1475
6OSK|1|1|U|1476
6OSK|1|1|A|1477
6OSK|1|1|G|1478
6OSK|1|1|G|1479
*
6OSK|1|1|C|1512
6OSK|1|1|U|1513
6OSK|1|1|G|1514
6OSK|1|1|A|1515
6OSK|1|1|G|1516
6OSK|1|1|G|1517

Current chains

Chain 1

23S ribosomal RNA

Nearby chains