3D structure

PDB id
6OSK (explore in PDB, NAKB, or RNA 3D Hub)
Description
RF1 accommodated 70S complex at 60 ms
Experimental method
ELECTRON MICROSCOPY
Resolution
3.6 Å

Loop

Sequence
GG*CAC
Length
5 nucleotides
Bulged bases
None detected
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
IL_6OSK_148 not in the Motif Atlas
Homologous match to IL_6CZR_150
Geometric discrepancy: 0.1708
The information below is about IL_6CZR_150
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

6OSK|1|2|G|953
6OSK|1|2|G|954
*
6OSK|1|2|C|1226
6OSK|1|2|A|1227
6OSK|1|2|C|1228

Current chains

Chain 2
16S ribosomal RNA

Nearby chains

Chain 5
Transfer RNA; tRNA
Chain A
Peptide chain release factor 1
Chain r
30S ribosomal protein S13
Chain x
30S ribosomal protein S19

Coloring options:


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