3D structure

PDB id
6OSK (explore in PDB, NAKB, or RNA 3D Hub)
Description
RF1 accommodated 70S complex at 60 ms
Experimental method
ELECTRON MICROSCOPY
Resolution
3.6 Å

Loop

Sequence
GCU*G(2MG)C
Length
6 nucleotides
Bulged bases
None detected
QA status
Self-complementary:

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
IL_6OSK_152 not in the Motif Atlas
Homologous match to IL_4LFB_043
Geometric discrepancy: 0.1641
The information below is about IL_4LFB_043
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

6OSK|1|2|G|1050
6OSK|1|2|C|1051
6OSK|1|2|U|1052
*
6OSK|1|2|G|1206
6OSK|1|2|2MG|1207
6OSK|1|2|C|1208

Current chains

Chain 2
16S ribosomal RNA

Nearby chains

Chain A
Peptide chain release factor 1
Chain h
30S ribosomal protein S3
Chain s
30S ribosomal protein S14

Coloring options:


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