IL_6OSK_163

3D structure

PDB id

6OSK (explore in PDB, NAKB, or RNA 3D Hub)

Description

RF1 accommodated 70S complex at 60 ms

Experimental method

ELECTRON MICROSCOPY

Resolution

3.6 Å

Loop

Sequence

CGGAUU*AUGAAG

Length

12 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_6OSK_163 not in the Motif Atlas

Geometric match to IL_5J7L_057

Geometric discrepancy: 0.1161

The information below is about IL_5J7L_057

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_85536.2

Basepair signature

cWW-tSH-L-R-tHS-cWW-cWW

Number of instances in this motif group

8

Unit IDs

6OSK|1|2|C|1303
6OSK|1|2|G|1304
6OSK|1|2|G|1305
6OSK|1|2|A|1306
6OSK|1|2|U|1307
6OSK|1|2|U|1308
*
6OSK|1|2|A|1329
6OSK|1|2|U|1330
6OSK|1|2|G|1331
6OSK|1|2|A|1332
6OSK|1|2|A|1333
6OSK|1|2|G|1334

Current chains

Chain 2

16S ribosomal RNA

Nearby chains

Chain r

30S ribosomal protein S13