IL_6OSK_178

3D structure

PDB id

6OSK (explore in PDB, NAKB, or RNA 3D Hub)

Description

RF1 accommodated 70S complex at 60 ms

Experimental method

ELECTRON MICROSCOPY

Resolution

3.6 Å

Loop

Sequence

AAUUC*GUUAU

Length

10 nucleotides

Bulged bases

6OSK|1|1|U|846, 6OSK|1|1|U|931

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_6OSK_178 not in the Motif Atlas

Geometric match to IL_5J7L_399

Geometric discrepancy: 0.3359

The information below is about IL_5J7L_399

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_96236.1

Basepair signature

cWW-tWW-cWW-L-cWW

Number of instances in this motif group

1

Unit IDs

6OSK|1|1|A|844
6OSK|1|1|A|845
6OSK|1|1|U|846
6OSK|1|1|U|847
6OSK|1|1|C|848
*
6OSK|1|1|G|930
6OSK|1|1|U|931
6OSK|1|1|U|932
6OSK|1|1|A|933
6OSK|1|1|U|934

Current chains

Chain 1

23S ribosomal RNA

Nearby chains

Chain Z

50S ribosomal protein L30