3D structure

PDB id
6OSK (explore in PDB, NAKB, or RNA 3D Hub)
Description
RF1 accommodated 70S complex at 60 ms
Experimental method
ELECTRON MICROSCOPY
Resolution
3.6 Å

Loop

Sequence
AAUUC*GUUAU
Length
10 nucleotides
Bulged bases
6OSK|1|1|U|846, 6OSK|1|1|U|931
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
IL_6OSK_178 not in the Motif Atlas
Geometric match to IL_5J7L_399
Geometric discrepancy: 0.3359
The information below is about IL_5J7L_399
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
IL_96236.1
Basepair signature
cWW-tWW-cWW-L-cWW
Number of instances in this motif group
1

Unit IDs

6OSK|1|1|A|844
6OSK|1|1|A|845
6OSK|1|1|U|846
6OSK|1|1|U|847
6OSK|1|1|C|848
*
6OSK|1|1|G|930
6OSK|1|1|U|931
6OSK|1|1|U|932
6OSK|1|1|A|933
6OSK|1|1|U|934

Current chains

Chain 1
23S ribosomal RNA

Nearby chains

Chain Z
50S ribosomal protein L30

Coloring options:


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