IL_6OSQ_176

3D structure

PDB id

6OSQ (explore in PDB, NAKB, or RNA 3D Hub)

Description

RF1 accommodated state bound Release complex 70S at long incubation time point

Experimental method

ELECTRON MICROSCOPY

Resolution

3.5 Å

Loop

Sequence

AAUUC*GUUAU

Length

10 nucleotides

Bulged bases

6OSQ|1|1|U|846, 6OSQ|1|1|U|931

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_6OSQ_176 not in the Motif Atlas

Geometric match to IL_5J7L_399

Geometric discrepancy: 0.1506

The information below is about IL_5J7L_399

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_96236.1

Basepair signature

cWW-tWW-cWW-L-cWW

Number of instances in this motif group

1

Unit IDs

6OSQ|1|1|A|844
6OSQ|1|1|A|845
6OSQ|1|1|U|846
6OSQ|1|1|U|847
6OSQ|1|1|C|848
*
6OSQ|1|1|G|930
6OSQ|1|1|U|931
6OSQ|1|1|U|932
6OSQ|1|1|A|933
6OSQ|1|1|U|934

Current chains

Chain 1

23S ribosomal RNA

Nearby chains

Chain Z

50S ribosomal protein L30