IL_6OSQ_184

3D structure

PDB id

6OSQ (explore in PDB, NAKB, or RNA 3D Hub)

Description

RF1 accommodated state bound Release complex 70S at long incubation time point

Experimental method

ELECTRON MICROSCOPY

Resolution

3.5 Å

Loop

Sequence

CCUUGAUGUGUAGGAUAGGUGGGAGGCUUUGAAGUGUGGAC*GUCUGCAUGGAGCCGACCUUGAAAUACCACCCUUUAAUG

Length

80 nucleotides

Bulged bases

6OSQ|1|1|U|2111, 6OSQ|1|1|G|2112, 6OSQ|1|1|G|2116, 6OSQ|1|1|U|2130, 6OSQ|1|1|U|2131, 6OSQ|1|1|U|2132, 6OSQ|1|1|U|2139, 6OSQ|1|1|A|2163, 6OSQ|1|1|C|2164, 6OSQ|1|1|U|2172

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6OSQ|1|1|C|2103
6OSQ|1|1|C|2104
6OSQ|1|1|U|2105
6OSQ|1|1|U|2106
6OSQ|1|1|G|2107
6OSQ|1|1|A|2108
6OSQ|1|1|U|2109
6OSQ|1|1|G|2110
6OSQ|1|1|U|2111
6OSQ|1|1|G|2112
6OSQ|1|1|U|2113
6OSQ|1|1|A|2114
6OSQ|1|1|G|2115
6OSQ|1|1|G|2116
6OSQ|1|1|A|2117
6OSQ|1|1|U|2118
6OSQ|1|1|A|2119
6OSQ|1|1|G|2120
6OSQ|1|1|G|2121
6OSQ|1|1|U|2122
6OSQ|1|1|G|2123
6OSQ|1|1|G|2124
6OSQ|1|1|G|2125
6OSQ|1|1|A|2126
6OSQ|1|1|G|2127
6OSQ|1|1|G|2128
6OSQ|1|1|C|2129
6OSQ|1|1|U|2130
6OSQ|1|1|U|2131
6OSQ|1|1|U|2132
6OSQ|1|1|G|2133
6OSQ|1|1|A|2134
6OSQ|1|1|A|2135
6OSQ|1|1|G|2136
6OSQ|1|1|U|2137
6OSQ|1|1|G|2138
6OSQ|1|1|U|2139
6OSQ|1|1|G|2140
6OSQ|1|1|G|2141
6OSQ|1|1|A|2142
6OSQ|1|1|C|2143
*
6OSQ|1|1|G|2148
6OSQ|1|1|U|2149
6OSQ|1|1|C|2150
6OSQ|1|1|U|2151
6OSQ|1|1|G|2152
6OSQ|1|1|C|2153
6OSQ|1|1|A|2154
6OSQ|1|1|U|2155
6OSQ|1|1|G|2156
6OSQ|1|1|G|2157
6OSQ|1|1|A|2158
6OSQ|1|1|G|2159
6OSQ|1|1|C|2160
6OSQ|1|1|C|2161
6OSQ|1|1|G|2162
6OSQ|1|1|A|2163
6OSQ|1|1|C|2164
6OSQ|1|1|C|2165
6OSQ|1|1|U|2166
6OSQ|1|1|U|2167
6OSQ|1|1|G|2168
6OSQ|1|1|A|2169
6OSQ|1|1|A|2170
6OSQ|1|1|A|2171
6OSQ|1|1|U|2172
6OSQ|1|1|A|2173
6OSQ|1|1|C|2174
6OSQ|1|1|C|2175
6OSQ|1|1|A|2176
6OSQ|1|1|C|2177
6OSQ|1|1|C|2178
6OSQ|1|1|C|2179
6OSQ|1|1|U|2180
6OSQ|1|1|U|2181
6OSQ|1|1|U|2182
6OSQ|1|1|A|2183
6OSQ|1|1|A|2184
6OSQ|1|1|U|2185
6OSQ|1|1|G|2186

Current chains

Chain 1

23S ribosomal RNA

Nearby chains