3D structure

PDB id
6OT3 (explore in PDB, NAKB, or RNA 3D Hub)
Description
RF2 accommodated state bound Release complex 70S at 24 ms
Experimental method
ELECTRON MICROSCOPY
Resolution
3.9 Å

Loop

Sequence
GG*UGC
Length
5 nucleotides
Bulged bases
6OT3|1|2|G|94
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
IL_6OT3_112 not in the Motif Atlas
Geometric match to IL_6JQ5_001
Geometric discrepancy: 0.3755
The information below is about IL_6JQ5_001
Detailed Annotation
Stack outside cWW
Broad Annotation
Stack outside cWW
Motif group
IL_00225.14
Basepair signature
cWW-L-cWW
Number of instances in this motif group
50

Unit IDs

6OT3|1|2|G|75
6OT3|1|2|G|76
*
6OT3|1|2|U|93
6OT3|1|2|G|94
6OT3|1|2|C|95

Current chains

Chain 2
16S ribosomal RNA

Nearby chains

No other chains within 10Å

Coloring options:


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