IL_6OT3_147

3D structure

PDB id

6OT3 (explore in PDB, NAKB, or RNA 3D Hub)

Description

RF2 accommodated state bound Release complex 70S at 24 ms

Experimental method

ELECTRON MICROSCOPY

Resolution

3.9 Å

Loop

Sequence

GUG*CC

Length

5 nucleotides

Bulged bases

6OT3|1|2|U|1049

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_6OT3_147 not in the Motif Atlas

Homologous match to IL_4LFB_042

Geometric discrepancy: 0.2033

The information below is about IL_4LFB_042

Detailed Annotation

Single bulged U

Broad Annotation

No text annotation

Motif group

IL_89505.4

Basepair signature

cWW-L-cWW

Number of instances in this motif group

117

Unit IDs

6OT3|1|2|G|1048
6OT3|1|2|U|1049
6OT3|1|2|G|1050
*
6OT3|1|2|C|1208
6OT3|1|2|C|1209

Current chains

Chain 2

16S ribosomal RNA

Nearby chains

Chain A

Peptide chain release factor 2

Chain s

30S ribosomal protein S14