IL_6OTR_122

3D structure

PDB id

6OTR (explore in PDB, NAKB, or RNA 3D Hub)

Description

Dimeric E.coli YoeB bound to Thermus thermophilus 70S post-cleavage (AAU)

Experimental method

X-RAY DIFFRACTION

Resolution

3.12 Å

Loop

Sequence

GUG*CAACAAGC

Length

11 nucleotides

Bulged bases

6OTR|1|RA|C|1509

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6OTR|1|RA|G|1480
6OTR|1|RA|U|1482
6OTR|1|RA|G|1483
*
6OTR|1|RA|C|1506
6OTR|1|RA|A|1507
6OTR|1|RA|A|1508
6OTR|1|RA|C|1509
6OTR|1|RA|A|1510
6OTR|1|RA|A|1511
6OTR|1|RA|G|1512
6OTR|1|RA|C|1513

Current chains

Chain RA

23S rRNA

Nearby chains