IL_6OTR_192
3D structure
- PDB id
- 6OTR (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Dimeric E.coli YoeB bound to Thermus thermophilus 70S post-cleavage (AAU)
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.12 Å
Loop
- Sequence
- GGAAGAAG*UGUAAAC
- Length
- 15 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6OTR_192 not in the Motif Atlas
- Homologous match to IL_4LFB_017
- Geometric discrepancy: 0.1095
- The information below is about IL_4LFB_017
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_62329.1
- Basepair signature
- cWW-tSH-tWH-cWH-L-tHW-tSS-tHH-cWW
- Number of instances in this motif group
- 2
Unit IDs
6OTR|1|XA|G|409
6OTR|1|XA|G|410
6OTR|1|XA|A|411
6OTR|1|XA|A|412
6OTR|1|XA|G|413
6OTR|1|XA|A|414
6OTR|1|XA|A|415
6OTR|1|XA|G|416
*
6OTR|1|XA|U|427
6OTR|1|XA|G|428
6OTR|1|XA|U|429
6OTR|1|XA|A|430
6OTR|1|XA|A|431
6OTR|1|XA|A|432
6OTR|1|XA|C|433
Current chains
- Chain XA
- 16S rRNA
Nearby chains
- Chain XD
- 30S ribosomal protein S4
Coloring options: