IL_6OUO_008

3D structure

PDB id

6OUO (explore in PDB, NAKB, or RNA 3D Hub)

Description

RF2 accommodated state bound 70S complex at long incubation time

Experimental method

ELECTRON MICROSCOPY

Resolution

3.7 Å

Loop

Sequence

CCUGAAUC*GUGAG

Length

13 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_6OUO_008 not in the Motif Atlas

Homologous match to IL_5J7L_253

Geometric discrepancy: 0.3918

The information below is about IL_5J7L_253

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_77870.1

Basepair signature

cWW-L-R-L-tHS-L-cWW-L-cWW

Number of instances in this motif group

2

Unit IDs

6OUO|1|1|C|274
6OUO|1|1|C|275
6OUO|1|1|U|276
6OUO|1|1|G|277
6OUO|1|1|A|278
6OUO|1|1|A|279
6OUO|1|1|U|280
6OUO|1|1|C|281
*
6OUO|1|1|G|359
6OUO|1|1|U|360
6OUO|1|1|G|361
6OUO|1|1|A|362
6OUO|1|1|G|363

Current chains

Chain 1

23S ribosomal RNA

Nearby chains