3D structure

PDB id
6OUO (explore in PDB, NAKB, or RNA 3D Hub)
Description
RF2 accommodated state bound 70S complex at long incubation time
Experimental method
ELECTRON MICROSCOPY
Resolution
3.7 Å

Loop

Sequence
GAAC*GAGUGAAAAAGAAC
Length
18 nucleotides
Bulged bases
6OUO|1|1|A|504, 6OUO|1|1|A|508
QA status
Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
IL_6OUO_010 not in the Motif Atlas
Homologous match to IL_5J7L_255
Geometric discrepancy: 0.1026
The information below is about IL_5J7L_255
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
IL_81516.2
Basepair signature
cWW-cWS-tSH-L-tWH-cWW-tSS-tSH-L-R-L
Number of instances in this motif group
6

Unit IDs

6OUO|1|1|G|481
6OUO|1|1|A|482
6OUO|1|1|A|483
6OUO|1|1|C|484
*
6OUO|1|1|G|496
6OUO|1|1|A|497
6OUO|1|1|G|498
6OUO|1|1|U|499
6OUO|1|1|G|500
6OUO|1|1|A|501
6OUO|1|1|A|502
6OUO|1|1|A|503
6OUO|1|1|A|504
6OUO|1|1|A|505
6OUO|1|1|G|506
6OUO|1|1|A|507
6OUO|1|1|A|508
6OUO|1|1|C|509

Current chains

Chain 1
23S ribosomal RNA

Nearby chains

Chain S
50S ribosomal protein L22
Chain U
50S ribosomal protein L24

Coloring options:


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