IL_6OUO_040

3D structure

PDB id

6OUO (explore in PDB, NAKB, or RNA 3D Hub)

Description

RF2 accommodated state bound 70S complex at long incubation time

Experimental method

ELECTRON MICROSCOPY

Resolution

3.7 Å

Loop

Sequence

GAAAG*CUC

Length

8 nucleotides

Bulged bases

6OUO|1|1|A|1088

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_6OUO_040 not in the Motif Atlas

Homologous match to IL_9DFE_043

Geometric discrepancy: 0.2573

The information below is about IL_9DFE_043

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6OUO|1|1|G|1087
6OUO|1|1|A|1088
6OUO|1|1|A|1089
6OUO|1|1|A|1090
6OUO|1|1|G|1091
*
6OUO|1|1|C|1100
6OUO|1|1|U|1101
6OUO|1|1|C|1102

Current chains

Chain 1

23S ribosomal RNA

Nearby chains

Chain f

50S ribosomal protein L36