3D structure

PDB id
6OUO (explore in PDB, NAKB, or RNA 3D Hub)
Description
RF2 accommodated state bound 70S complex at long incubation time
Experimental method
ELECTRON MICROSCOPY
Resolution
3.7 Å

Loop

Sequence
GUG*CC
Length
5 nucleotides
Bulged bases
6OUO|1|2|U|1049
QA status
Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
IL_6OUO_147 not in the Motif Atlas
Homologous match to IL_4LFB_042
Geometric discrepancy: 0.2033
The information below is about IL_4LFB_042
Detailed Annotation
Single bulged U
Broad Annotation
No text annotation
Motif group
IL_97561.1
Basepair signature
cWW-L-cWW
Number of instances in this motif group
129

Unit IDs

6OUO|1|2|G|1048
6OUO|1|2|U|1049
6OUO|1|2|G|1050
*
6OUO|1|2|C|1208
6OUO|1|2|C|1209

Current chains

Chain 2
16S ribosomal RNA

Nearby chains

Chain A
Peptide chain release factor 2
Chain s
30S ribosomal protein S14

Coloring options:


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