IL_6OUO_159

3D structure

PDB id

6OUO (explore in PDB, NAKB, or RNA 3D Hub)

Description

RF2 accommodated state bound 70S complex at long incubation time

Experimental method

ELECTRON MICROSCOPY

Resolution

3.7 Å

Loop

Sequence

CGGAUU*AUGAAG

Length

12 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_6OUO_159 not in the Motif Atlas

Homologous match to IL_5J7L_057

Geometric discrepancy: 0.1351

The information below is about IL_5J7L_057

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_85536.2

Basepair signature

cWW-tSH-L-R-tHS-cWW-cWW

Number of instances in this motif group

8

Unit IDs

6OUO|1|2|C|1303
6OUO|1|2|G|1304
6OUO|1|2|G|1305
6OUO|1|2|A|1306
6OUO|1|2|U|1307
6OUO|1|2|U|1308
*
6OUO|1|2|A|1329
6OUO|1|2|U|1330
6OUO|1|2|G|1331
6OUO|1|2|A|1332
6OUO|1|2|A|1333
6OUO|1|2|G|1334

Current chains

Chain 2

16S ribosomal RNA

Nearby chains

Chain r

30S ribosomal protein S13