IL_6OXI_148

3D structure

PDB id

6OXI (explore in PDB, NAKB, or RNA 3D Hub)

Description

Dimeric E.coli YoeB bound to Thermus thermophilus 70S post-cleavage (UAA)

Experimental method

X-RAY DIFFRACTION

Resolution

3.49 Å

Loop

Sequence

CUGUGAACC*GGGAG

Length

14 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6OXI|1|RA|C|2129
6OXI|1|RA|U|2130
6OXI|1|RA|G|2131
6OXI|1|RA|U|2132
6OXI|1|RA|G|2133
6OXI|1|RA|A|2134
6OXI|1|RA|A|2135
6OXI|1|RA|C|2136
6OXI|1|RA|C|2137
*
6OXI|1|RA|G|2155
6OXI|1|RA|G|2156
6OXI|1|RA|G|2157
6OXI|1|RA|A|2158
6OXI|1|RA|G|2159

Current chains

Chain RA

23S rRNA

Nearby chains