IL_6OXI_323
3D structure
- PDB id
- 6OXI (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Dimeric E.coli YoeB bound to Thermus thermophilus 70S post-cleavage (UAA)
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.49 Å
Loop
- Sequence
- GCGUAGGAUAG*CC
- Length
- 13 nucleotides
- Bulged bases
- 6OXI|1|YA|G|2112, 6OXI|1|YA|U|2113, 6OXI|1|YA|G|2116, 6OXI|1|YA|A|2117, 6OXI|1|YA|A|2119
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
6OXI|1|YA|G|2110
6OXI|1|YA|C|2111
6OXI|1|YA|G|2112
6OXI|1|YA|U|2113
6OXI|1|YA|A|2114
6OXI|1|YA|G|2115
6OXI|1|YA|G|2116
6OXI|1|YA|A|2117
6OXI|1|YA|U|2118
6OXI|1|YA|A|2119
6OXI|1|YA|G|2120
*
6OXI|1|YA|C|2178
6OXI|1|YA|C|2179
Current chains
- Chain YA
- 23S rRNA
Nearby chains
- Chain QA
- Small subunit ribosomal RNA; SSU rRNA
Coloring options: