IL_6OZI_003
3D structure
- PDB id
- 6OZI (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of Ciona intestinalis (Ci) Endonuclease V (D234N) in complex with a 23mer DNA containing an inosine followed by a ribo-adenosine
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 2.3 Å
Loop
- Sequence
- GC(DI)ATA*TTCCAC
- Length
- 12 nucleotides
- Bulged bases
- 6OZI|1|C|DC|4, 6OZI|1|C|DI|5, 6OZI|1|D|DA|20
- QA status
- Modified nucleotides: DI
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
6OZI|1|C|DG|3
6OZI|1|C|DC|4
6OZI|1|C|DI|5
6OZI|1|C|A|6
6OZI|1|C|DT|7
6OZI|1|C|DA|8
*
6OZI|1|D|DT|16
6OZI|1|D|DT|17
6OZI|1|D|DC|18
6OZI|1|D|DC|19
6OZI|1|D|DA|20
6OZI|1|D|DC|21
Current chains
- Chain C
- DNA/RNA (23-MER)
- Chain D
- DNA/RNA (23-MER)
Nearby chains
- Chain A
- endonuclease V isoform X2
- Chain B
- endonuclease V isoform X2
Coloring options: