IL_6P5N_120
3D structure
- PDB id
- 6P5N (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of a mammalian 80S ribosome in complex with a single translocated Israeli Acute Paralysis Virus IRES and eRF1
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.2 Å
Loop
- Sequence
- CUGGG*CG
- Length
- 7 nucleotides
- Bulged bases
- 6P5N|1|5|G|729, 6P5N|1|5|G|730
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6P5N_120 not in the Motif Atlas
- Geometric match to IL_8GLP_036
- Geometric discrepancy: 0.0851
- The information below is about IL_8GLP_036
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_75501.2
- Basepair signature
- cWW-L-cWW
- Number of instances in this motif group
- 3
Unit IDs
6P5N|1|5|C|727
6P5N|1|5|U|728
6P5N|1|5|G|729
6P5N|1|5|G|730
6P5N|1|5|G|731
*
6P5N|1|5|C|938
6P5N|1|5|G|939
Current chains
- Chain 5
- 28S rRNA
Nearby chains
- Chain AF
- L30
- Chain AM
- L14e
- Chain AS
- eL20
Coloring options: