IL_6P5N_206
3D structure
- PDB id
- 6P5N (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of a mammalian 80S ribosome in complex with a single translocated Israeli Acute Paralysis Virus IRES and eRF1
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.2 Å
Loop
- Sequence
- UGGGAGGCC*GGCCGCCGGUGAAAUACCA
- Length
- 28 nucleotides
- Bulged bases
- 6P5N|1|5|A|4046, 6P5N|1|5|A|4047
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
6P5N|1|5|U|3968
6P5N|1|5|G|3969
6P5N|1|5|G|3970
6P5N|1|5|G|3971
6P5N|1|5|A|3972
6P5N|1|5|G|3973
6P5N|1|5|G|3974
6P5N|1|5|C|3975
6P5N|1|5|C|3976
*
6P5N|1|5|G|4035
6P5N|1|5|G|4036
6P5N|1|5|C|4037
6P5N|1|5|C|4038
6P5N|1|5|G|4039
6P5N|1|5|C|4040
6P5N|1|5|C|4041
6P5N|1|5|G|4042
6P5N|1|5|G|4043
6P5N|1|5|U|4044
6P5N|1|5|G|4045
6P5N|1|5|A|4046
6P5N|1|5|A|4047
6P5N|1|5|A|4048
6P5N|1|5|U|4049
6P5N|1|5|A|4050
6P5N|1|5|C|4051
6P5N|1|5|C|4052
6P5N|1|5|A|4053
Current chains
- Chain 5
- 28S rRNA
Nearby chains
- Chain 1
- IAPV-IRES
- Chain AK
- uL1
Coloring options: