IL_6P5N_257
3D structure
- PDB id
- 6P5N (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of a mammalian 80S ribosome in complex with a single translocated Israeli Acute Paralysis Virus IRES and eRF1
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.2 Å
Loop
- Sequence
- AUGGUUACCCAUC*GUAAGGCUU
- Length
- 22 nucleotides
- Bulged bases
- 6P5N|1|1|U|6426, 6P5N|1|1|A|6431
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
6P5N|1|1|A|6425
6P5N|1|1|U|6426
6P5N|1|1|G|6427
6P5N|1|1|G|6428
6P5N|1|1|U|6429
6P5N|1|1|U|6430
6P5N|1|1|A|6431
6P5N|1|1|C|6432
6P5N|1|1|C|6433
6P5N|1|1|C|6434
6P5N|1|1|A|6435
6P5N|1|1|U|6436
6P5N|1|1|C|6437
*
6P5N|1|1|G|6467
6P5N|1|1|U|6468
6P5N|1|1|A|6469
6P5N|1|1|A|6470
6P5N|1|1|G|6471
6P5N|1|1|G|6472
6P5N|1|1|C|6473
6P5N|1|1|U|6474
6P5N|1|1|U|6475
Current chains
- Chain 1
- IAPV-IRES
Nearby chains
- Chain 5
- Large subunit ribosomal RNA; LSU rRNA
- Chain AK
- uL1
Coloring options: