IL_6PC6_039

3D structure

PDB id

6PC6 (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 50S ribosome bound to compound 47

Experimental method

ELECTRON MICROSCOPY

Resolution

2.5 Å

Loop

Sequence

GGA*UUAAAGAAAGCGUAAUAGCUCAC

Length

26 nucleotides

Bulged bases

6PC6|1|I|A|1084, 6PC6|1|I|A|1088, 6PC6|1|I|A|1095

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6PC6|1|I|G|1055
6PC6|1|I|G|1056
6PC6|1|I|A|1057
*
6PC6|1|I|U|1082
6PC6|1|I|U|1083
6PC6|1|I|A|1084
6PC6|1|I|A|1085
6PC6|1|I|A|1086
6PC6|1|I|G|1087
6PC6|1|I|A|1088
6PC6|1|I|A|1089
6PC6|1|I|A|1090
6PC6|1|I|G|1091
6PC6|1|I|C|1092
6PC6|1|I|G|1093
6PC6|1|I|U|1094
6PC6|1|I|A|1095
6PC6|1|I|A|1096
6PC6|1|I|U|1097
6PC6|1|I|A|1098
6PC6|1|I|G|1099
6PC6|1|I|C|1100
6PC6|1|I|U|1101
6PC6|1|I|C|1102
6PC6|1|I|A|1103
6PC6|1|I|C|1104

Current chains

Chain I

23S ribosomal RNA

Nearby chains