IL_6PC8_078

3D structure

PDB id

6PC8 (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 50S ribosome bound to compound 40q

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

GU(G7M)AA*UACUCC

Length

11 nucleotides

Bulged bases

6PC8|1|I|U|2068, 6PC8|1|I|A|2439

QA status

Modified nucleotides: G7M

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6PC8|1|I|G|2067
6PC8|1|I|U|2068
6PC8|1|I|G7M|2069
6PC8|1|I|A|2070
6PC8|1|I|A|2071
*
6PC8|1|I|U|2438
6PC8|1|I|A|2439
6PC8|1|I|C|2440
6PC8|1|I|U|2441
6PC8|1|I|C|2442
6PC8|1|I|C|2443

Current chains

Chain I

23S ribosomal RNA

Nearby chains

Chain K

50S ribosomal protein L2

Chain L

50S ribosomal protein L15

Chain M

50S ribosomal protein L4