IL_6PCQ_082

3D structure

PDB id

6PCQ (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 50S ribosome bound to VM2

Experimental method

ELECTRON MICROSCOPY

Resolution

2.6 Å

Loop

Sequence

CCUUGAUG*CUUUAAUG

Length

16 nucleotides

Bulged bases

6PCQ|1|I|C|2104

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6PCQ|1|I|C|2103
6PCQ|1|I|C|2104
6PCQ|1|I|U|2105
6PCQ|1|I|U|2106
6PCQ|1|I|G|2107
6PCQ|1|I|A|2108
6PCQ|1|I|U|2109
6PCQ|1|I|G|2110
*
6PCQ|1|I|C|2179
6PCQ|1|I|U|2180
6PCQ|1|I|U|2181
6PCQ|1|I|U|2182
6PCQ|1|I|A|2183
6PCQ|1|I|A|2184
6PCQ|1|I|U|2185
6PCQ|1|I|G|2186

Current chains

Chain I

23S ribosomal RNA

Nearby chains