IL_6PCQ_083

3D structure

PDB id

6PCQ (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 50S ribosome bound to VM2

Experimental method

ELECTRON MICROSCOPY

Resolution

2.6 Å

Loop

Sequence

GUGUAGGAUAGG*CCC

Length

15 nucleotides

Bulged bases

6PCQ|1|I|U|2111, 6PCQ|1|I|G|2116, 6PCQ|1|I|U|2118

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6PCQ|1|I|G|2110
6PCQ|1|I|U|2111
6PCQ|1|I|G|2112
6PCQ|1|I|U|2113
6PCQ|1|I|A|2114
6PCQ|1|I|G|2115
6PCQ|1|I|G|2116
6PCQ|1|I|A|2117
6PCQ|1|I|U|2118
6PCQ|1|I|A|2119
6PCQ|1|I|G|2120
6PCQ|1|I|G|2121
*
6PCQ|1|I|C|2177
6PCQ|1|I|C|2178
6PCQ|1|I|C|2179

Current chains

Chain I

23S ribosomal RNA

Nearby chains