IL_6PCS_043
3D structure
- PDB id
- 6PCS (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- E. coli 50S ribosome bound to compound 40e
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.8 Å
Loop
- Sequence
- GGUU*AC
- Length
- 6 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6PCS_043 not in the Motif Atlas
- Homologous match to IL_4WF9_049
- Geometric discrepancy: 0.1399
- The information below is about IL_4WF9_049
- Detailed Annotation
- Major groove platform; stack outside cWW
- Broad Annotation
- No text annotation
- Motif group
- IL_50694.7
- Basepair signature
- cWW-tSH-cWW-L
- Number of instances in this motif group
- 27
Unit IDs
6PCS|1|I|G|1310
6PCS|1|I|G|1311
6PCS|1|I|U|1312
6PCS|1|I|U|1313
*
6PCS|1|I|A|1603
6PCS|1|I|C|1604
Current chains
- Chain I
- 23S ribosomal RNA
Nearby chains
No other chains within 10ÅColoring options: