IL_6PCT_112

3D structure

PDB id

6PCT (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 50S ribosome bound to compound 41q

Experimental method

ELECTRON MICROSCOPY

Resolution

2.8 Å

Loop

Sequence

GAUGUUGG*CCAUCAUUUAAAGAAAGCGUAAUAGCUCAC

Length

38 nucleotides

Bulged bases

6PCT|1|I|U|1061, 6PCT|1|I|U|1078, 6PCT|1|I|A|1095, 6PCT|1|I|A|1096

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6PCT|1|I|G|1056
6PCT|1|I|A|1057
6PCT|1|I|U|1058
6PCT|1|I|G|1059
6PCT|1|I|U|1060
6PCT|1|I|U|1061
6PCT|1|I|G|1062
6PCT|1|I|G|1063
*
6PCT|1|I|C|1075
6PCT|1|I|C|1076
6PCT|1|I|A|1077
6PCT|1|I|U|1078
6PCT|1|I|C|1079
6PCT|1|I|A|1080
6PCT|1|I|U|1081
6PCT|1|I|U|1082
6PCT|1|I|U|1083
6PCT|1|I|A|1084
6PCT|1|I|A|1085
6PCT|1|I|A|1086
6PCT|1|I|G|1087
6PCT|1|I|A|1088
6PCT|1|I|A|1089
6PCT|1|I|A|1090
6PCT|1|I|G|1091
6PCT|1|I|C|1092
6PCT|1|I|G|1093
6PCT|1|I|U|1094
6PCT|1|I|A|1095
6PCT|1|I|A|1096
6PCT|1|I|U|1097
6PCT|1|I|A|1098
6PCT|1|I|G|1099
6PCT|1|I|C|1100
6PCT|1|I|U|1101
6PCT|1|I|C|1102
6PCT|1|I|A|1103
6PCT|1|I|C|1104

Current chains

Chain I

23S ribosomal RNA

Nearby chains