IL_6PJ6_021
3D structure
- PDB id
- 6PJ6 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- High resolution cryo-EM structure of E.coli 50S
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.2 Å
Loop
- Sequence
- GGG*CAAUC
- Length
- 8 nucleotides
- Bulged bases
- 6PJ6|1|I|G|776, 6PJ6|1|I|A|788, 6PJ6|1|I|A|789
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6PJ6_021 not in the Motif Atlas
- Geometric match to IL_4V9F_030
- Geometric discrepancy: 0.0873
- The information below is about IL_4V9F_030
- Detailed Annotation
- Multiple bulged bases
- Broad Annotation
- No text annotation
- Motif group
- IL_57881.1
- Basepair signature
- cWW-L-cWW
- Number of instances in this motif group
- 1
Unit IDs
6PJ6|1|I|G|775
6PJ6|1|I|G|776
6PJ6|1|I|G|777
*
6PJ6|1|I|C|787
6PJ6|1|I|A|788
6PJ6|1|I|A|789
6PJ6|1|I|U|790
6PJ6|1|I|C|791
Current chains
- Chain I
- 23S rRNA
Nearby chains
- Chain K
- 50S ribosomal protein L2
- Chain a
- 50S ribosomal protein L22
- Chain k
- 50S ribosomal protein L34
Coloring options: