IL_6PJ6_039

3D structure

PDB id

6PJ6 (explore in PDB, NAKB, or RNA 3D Hub)

Description

High resolution cryo-EM structure of E.coli 50S

Experimental method

ELECTRON MICROSCOPY

Resolution

2.2 Å

Loop

Sequence

CCCAGACAGCCA*UGGUCGAG

Length

20 nucleotides

Bulged bases

6PJ6|1|I|A|1046

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6PJ6|1|I|C|1043
6PJ6|1|I|C|1044
6PJ6|1|I|C|1045
6PJ6|1|I|A|1046
6PJ6|1|I|G|1047
6PJ6|1|I|A|1048
6PJ6|1|I|C|1049
6PJ6|1|I|A|1050
6PJ6|1|I|G|1051
6PJ6|1|I|C|1052
6PJ6|1|I|C|1053
6PJ6|1|I|A|1054
*
6PJ6|1|I|U|1105
6PJ6|1|I|G|1106
6PJ6|1|I|G|1107
6PJ6|1|I|U|1108
6PJ6|1|I|C|1109
6PJ6|1|I|G|1110
6PJ6|1|I|A|1111
6PJ6|1|I|G|1112

Current chains

Chain I

23S rRNA

Nearby chains

Chain O

50S ribosomal protein L6

Chain m

50S ribosomal protein L36