IL_6PJ6_085

3D structure

PDB id

6PJ6 (explore in PDB, NAKB, or RNA 3D Hub)

Description

High resolution cryo-EM structure of E.coli 50S

Experimental method

ELECTRON MICROSCOPY

Resolution

2.2 Å

Loop

Sequence

AUGUGUAGGAUAGGUGGGAGGCUUUGAAGUGUGGAC*GUCUGCAUGGAGCCGACCUUGAAAUACCACCCUU

Length

70 nucleotides

Bulged bases

6PJ6|1|I|U|2132, 6PJ6|1|I|A|2158, 6PJ6|1|I|G|2168, 6PJ6|1|I|U|2172

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6PJ6|1|I|A|2108
6PJ6|1|I|U|2109
6PJ6|1|I|G|2110
6PJ6|1|I|U|2111
6PJ6|1|I|G|2112
6PJ6|1|I|U|2113
6PJ6|1|I|A|2114
6PJ6|1|I|G|2115
6PJ6|1|I|G|2116
6PJ6|1|I|A|2117
6PJ6|1|I|U|2118
6PJ6|1|I|A|2119
6PJ6|1|I|G|2120
6PJ6|1|I|G|2121
6PJ6|1|I|U|2122
6PJ6|1|I|G|2123
6PJ6|1|I|G|2124
6PJ6|1|I|G|2125
6PJ6|1|I|A|2126
6PJ6|1|I|G|2127
6PJ6|1|I|G|2128
6PJ6|1|I|C|2129
6PJ6|1|I|U|2130
6PJ6|1|I|U|2131
6PJ6|1|I|U|2132
6PJ6|1|I|G|2133
6PJ6|1|I|A|2134
6PJ6|1|I|A|2135
6PJ6|1|I|G|2136
6PJ6|1|I|U|2137
6PJ6|1|I|G|2138
6PJ6|1|I|U|2139
6PJ6|1|I|G|2140
6PJ6|1|I|G|2141
6PJ6|1|I|A|2142
6PJ6|1|I|C|2143
*
6PJ6|1|I|G|2148
6PJ6|1|I|U|2149
6PJ6|1|I|C|2150
6PJ6|1|I|U|2151
6PJ6|1|I|G|2152
6PJ6|1|I|C|2153
6PJ6|1|I|A|2154
6PJ6|1|I|U|2155
6PJ6|1|I|G|2156
6PJ6|1|I|G|2157
6PJ6|1|I|A|2158
6PJ6|1|I|G|2159
6PJ6|1|I|C|2160
6PJ6|1|I|C|2161
6PJ6|1|I|G|2162
6PJ6|1|I|A|2163
6PJ6|1|I|C|2164
6PJ6|1|I|C|2165
6PJ6|1|I|U|2166
6PJ6|1|I|U|2167
6PJ6|1|I|G|2168
6PJ6|1|I|A|2169
6PJ6|1|I|A|2170
6PJ6|1|I|A|2171
6PJ6|1|I|U|2172
6PJ6|1|I|A|2173
6PJ6|1|I|C|2174
6PJ6|1|I|C|2175
6PJ6|1|I|A|2176
6PJ6|1|I|C|2177
6PJ6|1|I|C|2178
6PJ6|1|I|C|2179
6PJ6|1|I|U|2180
6PJ6|1|I|U|2181

Current chains

Chain I

23S rRNA

Nearby chains