IL_6PJ6_097
3D structure
- PDB id
- 6PJ6 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- High resolution cryo-EM structure of E.coli 50S
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.2 Å
Loop
- Sequence
- GAAC*G(PSU)(PSU)C
- Length
- 8 nucleotides
- Bulged bases
- None detected
- QA status
- Self-complementary:
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6PJ6_097 not in the Motif Atlas
- Geometric match to IL_361D_001
- Geometric discrepancy: 0.3497
- The information below is about IL_361D_001
- Detailed Annotation
- Tandem non-canonical cWW pairs
- Broad Annotation
- No text annotation
- Motif group
- IL_30621.4
- Basepair signature
- cWW-cWW-cWW-cWW
- Number of instances in this motif group
- 66
Unit IDs
6PJ6|1|I|G|2588
6PJ6|1|I|A|2589
6PJ6|1|I|A|2590
6PJ6|1|I|C|2591
*
6PJ6|1|I|G|2603
6PJ6|1|I|PSU|2604
6PJ6|1|I|PSU|2605
6PJ6|1|I|C|2606
Current chains
- Chain I
- 23S rRNA
Nearby chains
- Chain K
- 50S ribosomal protein L2
Coloring options: