IL_6PPF_094

3D structure

PDB id

6PPF (explore in PDB, NAKB, or RNA 3D Hub)

Description

Bacterial 45SRbgA ribosomal particle class B

Experimental method

ELECTRON MICROSCOPY

Resolution

3.4 Å

Loop

Sequence

CGAUGGUAGUCGG*CCUGUGAGAGUAG

Length

26 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6PPF|1|B|C|69
6PPF|1|B|G|70
6PPF|1|B|A|71
6PPF|1|B|U|72
6PPF|1|B|G|73
6PPF|1|B|G|74
6PPF|1|B|U|75
6PPF|1|B|A|76
6PPF|1|B|G|77
6PPF|1|B|U|78
6PPF|1|B|C|79
6PPF|1|B|G|80
6PPF|1|B|G|81
*
6PPF|1|B|C|91
6PPF|1|B|C|92
6PPF|1|B|U|93
6PPF|1|B|G|94
6PPF|1|B|U|95
6PPF|1|B|G|96
6PPF|1|B|A|97
6PPF|1|B|G|98
6PPF|1|B|A|99
6PPF|1|B|G|100
6PPF|1|B|U|101
6PPF|1|B|A|102
6PPF|1|B|G|103

Current chains

Chain B

5S rRNA

Nearby chains

Chain A

Large subunit ribosomal RNA; LSU rRNA

Chain V

50S ribosomal protein L27

Chain Z

50S ribosomal protein L30