IL_6Q9A_183

3D structure

PDB id

6Q9A (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of tmRNA SmpB bound past E site of E. coli 70S ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

3.7 Å

Loop

Sequence

CCUAGC*GACGGG

Length

12 nucleotides

Bulged bases

6Q9A|1|4|A|149, 6Q9A|1|4|A|165, 6Q9A|1|4|C|166

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6Q9A|1|4|C|146
6Q9A|1|4|C|147
6Q9A|1|4|U|148
6Q9A|1|4|A|149
6Q9A|1|4|G|150
6Q9A|1|4|C|151
*
6Q9A|1|4|G|164
6Q9A|1|4|A|165
6Q9A|1|4|C|166
6Q9A|1|4|G|167
6Q9A|1|4|G|168
6Q9A|1|4|G|169

Current chains

Chain 4

tmRNA

Nearby chains

Chain o

30S ribosomal protein S10