IL_6Q9A_184

3D structure

PDB id

6Q9A (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of tmRNA SmpB bound past E site of E. coli 70S ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

3.7 Å

Loop

Sequence

GUGGAAGCC*GGUUGAAGC

Length

18 nucleotides

Bulged bases

6Q9A|1|4|U|203, 6Q9A|1|4|G|223, 6Q9A|1|4|A|224

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6Q9A|1|4|G|202
6Q9A|1|4|U|203
6Q9A|1|4|G|204
6Q9A|1|4|G|205
6Q9A|1|4|A|206
6Q9A|1|4|A|207
6Q9A|1|4|G|208
6Q9A|1|4|C|209
6Q9A|1|4|C|210
*
6Q9A|1|4|G|219
6Q9A|1|4|G|220
6Q9A|1|4|U|221
6Q9A|1|4|U|222
6Q9A|1|4|G|223
6Q9A|1|4|A|224
6Q9A|1|4|A|225
6Q9A|1|4|G|226
6Q9A|1|4|C|227

Current chains

Chain 4

tmRNA

Nearby chains