IL_6Q9A_194

3D structure

PDB id

6Q9A (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of tmRNA SmpB bound past E site of E. coli 70S ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

3.7 Å

Loop

Sequence

GGCUUUGAAGU*AUGGAGCC

Length

19 nucleotides

Bulged bases

6Q9A|1|1|U|2132

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6Q9A|1|1|G|2127
6Q9A|1|1|G|2128
6Q9A|1|1|C|2129
6Q9A|1|1|U|2130
6Q9A|1|1|U|2131
6Q9A|1|1|U|2132
6Q9A|1|1|G|2133
6Q9A|1|1|A|2134
6Q9A|1|1|A|2135
6Q9A|1|1|G|2136
6Q9A|1|1|U|2137
*
6Q9A|1|1|A|2154
6Q9A|1|1|U|2155
6Q9A|1|1|G|2156
6Q9A|1|1|G|2157
6Q9A|1|1|A|2158
6Q9A|1|1|G|2159
6Q9A|1|1|C|2160
6Q9A|1|1|C|2161

Current chains

Chain 1

23S ribosomal RNA

Nearby chains