IL_6QDV_001
3D structure
- PDB id
- 6QDV (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Human post-catalytic P complex spliceosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.3 Å
Loop
- Sequence
- GUGUA*UUAUCC
- Length
- 11 nucleotides
- Bulged bases
- 6QDV|1|I|A|144
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
6QDV|1|2|G|31
6QDV|1|2|U|32
6QDV|1|2|G|33
6QDV|1|2|U|34
6QDV|1|2|A|35
*
6QDV|1|I|U|142
6QDV|1|I|U|143
6QDV|1|I|A|144
6QDV|1|I|U|145
6QDV|1|I|C|146
6QDV|1|I|C|147
Current chains
- Chain 2
- U2 snRNA
- Chain I
- Intron lariat: MINX RNA
Nearby chains
- Chain 6
- U6 spliceosomal RNA; U6 snRNA
- Chain A
- Pre-mRNA-processing-splicing factor 8
- Chain D
- PRKR-interacting protein 1
- Chain F
- Cactin
- Chain o
- Pre-mRNA-processing factor 17
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