IL_6QDV_006
3D structure
- PDB id
- 6QDV (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Human post-catalytic P complex spliceosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.3 Å
Loop
- Sequence
- GGAACG*CUCG*C
- Length
- 11 nucleotides
- Bulged bases
- 6QDV|1|I|G|12
- QA status
- Missing nucleotides
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
6QDV|1|6|G|33
6QDV|1|6|G|34
6QDV|1|6|A|35
6QDV|1|6|A|36
6QDV|1|6|C|37
6QDV|1|6|G|38
*
6QDV|1|I|C|9
6QDV|1|I|U|10
6QDV|1|I|C|13
6QDV|1|I|G|12
*
6QDV|1|I|C|13
Current chains
- Chain 6
- U6 snRNA
- Chain I
- Intron lariat: MINX RNA
Nearby chains
- Chain A
- Pre-mRNA-processing-splicing factor 8
- Chain M
- Pre-mRNA-splicing factor RBM22
- Chain O
- Cell division cycle 5-like protein
- Chain o
- Pre-mRNA-processing factor 17
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