IL_6QIK_016

3D structure

PDB id

6QIK (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structures of Lsg1-TAP pre-60S ribosomal particles

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

AGACAGG*CAUAAU

Length

13 nucleotides

Bulged bases

6QIK|1|A|A|621

QA status

Missing nucleotides

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6QIK|1|A|A|436
6QIK|1|A|G|437
6QIK|1|A|A|438
6QIK|1|A|C|439
6QIK|1|A|A|440
6QIK|1|A|G|494
6QIK|1|A|G|495
*
6QIK|1|A|C|618
6QIK|1|A|A|619
6QIK|1|A|U|620
6QIK|1|A|A|621
6QIK|1|A|A|622
6QIK|1|A|U|623

Current chains

Chain A

25S ribosomal RNA

Nearby chains

Chain G

60S ribosomal protein L6-A

Chain e

60S ribosomal protein L32

Chain f

60S ribosomal protein L33-A