IL_6QIK_150
3D structure
- PDB id
- 6QIK (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structures of Lsg1-TAP pre-60S ribosomal particles
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.1 Å
Loop
- Sequence
- AGAGGGUGUAGAAUAAGUG*CCACUACCUUU
- Length
- 30 nucleotides
- Bulged bases
- 6QIK|1|A|G|2454, 6QIK|1|A|U|2455, 6QIK|1|A|A|2461
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
6QIK|1|A|A|2447
6QIK|1|A|G|2448
6QIK|1|A|A|2449
6QIK|1|A|G|2450
6QIK|1|A|G|2451
6QIK|1|A|G|2452
6QIK|1|A|U|2453
6QIK|1|A|G|2454
6QIK|1|A|U|2455
6QIK|1|A|A|2456
6QIK|1|A|G|2457
6QIK|1|A|A|2458
6QIK|1|A|A|2459
6QIK|1|A|U|2460
6QIK|1|A|A|2461
6QIK|1|A|A|2462
6QIK|1|A|G|2463
6QIK|1|A|U|2464
6QIK|1|A|G|2465
*
6QIK|1|A|C|2489
6QIK|1|A|C|2490
6QIK|1|A|A|2491
6QIK|1|A|C|2492
6QIK|1|A|U|2493
6QIK|1|A|A|2494
6QIK|1|A|C|2495
6QIK|1|A|C|2496
6QIK|1|A|U|2497
6QIK|1|A|U|2498
6QIK|1|A|U|2499
Current chains
- Chain A
- 25S ribosomal RNA
Nearby chains
- Chain p
- uL1
Coloring options: