IL_6QNQ_029

3D structure

PDB id

6QNQ (explore in PDB, NAKB, or RNA 3D Hub)

Description

70S ribosome initiation complex (IC) with experimentally assigned potassium ions

Experimental method

X-RAY DIFFRACTION

Resolution

3.5 Å

Loop

Sequence

GGAGAG*UGGUC

Length

11 nucleotides

Bulged bases

6QNQ|1|13|A|665

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6QNQ|1|13|G|661
6QNQ|1|13|G|662
6QNQ|1|13|A|663
6QNQ|1|13|G|664
6QNQ|1|13|A|665
6QNQ|1|13|G|666
*
6QNQ|1|13|U|740
6QNQ|1|13|G|741
6QNQ|1|13|G|742
6QNQ|1|13|U|743
6QNQ|1|13|C|744

Current chains

Chain 13

16S ribosomal RNA

Nearby chains

Chain 5E

30S ribosomal protein S6

Chain 6I

30S ribosomal protein S15

Chain 9I

30S ribosomal protein S18