IL_6QNQ_120
3D structure
- PDB id
- 6QNQ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 70S ribosome initiation complex (IC) with experimentally assigned potassium ions
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.5 Å
Loop
- Sequence
- ACUCUG*CUGU
- Length
- 10 nucleotides
- Bulged bases
- 6QNQ|1|14|G|1992
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6QNQ_120 not in the Motif Atlas
- Homologous match to IL_5J7L_307
- Geometric discrepancy: 0.0985
- The information below is about IL_5J7L_307
- Detailed Annotation
- Intercalated tWH
- Broad Annotation
- Intercalated tWH
- Motif group
- IL_76758.2
- Basepair signature
- cWW-L-R-L-cWW-L-L
- Number of instances in this motif group
- 7
Unit IDs
6QNQ|1|14|A|1669
6QNQ|1|14|C|1670
6QNQ|1|14|U|1671
6QNQ|1|14|C|1672
6QNQ|1|14|U|1673
6QNQ|1|14|G|1674
*
6QNQ|1|14|C|1990
6QNQ|1|14|U|1991
6QNQ|1|14|G|1992
6QNQ|1|14|U|1993
Current chains
- Chain 14
- 23S ribosomal RNA
Nearby chains
- Chain 25
- 50S ribosomal protein L14
- Chain 29
- 50S ribosomal protein L3
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