IL_6QNQ_137

3D structure

PDB id

6QNQ (explore in PDB, NAKB, or RNA 3D Hub)

Description

70S ribosome initiation complex (IC) with experimentally assigned potassium ions

Experimental method

X-RAY DIFFRACTION

Resolution

3.5 Å

Loop

Sequence

GCCUGUGAAC*GGGAGGC

Length

17 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6QNQ|1|14|G|2127
6QNQ|1|14|C|2128
6QNQ|1|14|C|2129
6QNQ|1|14|U|2130
6QNQ|1|14|G|2131
6QNQ|1|14|U|2132
6QNQ|1|14|G|2133
6QNQ|1|14|A|2134
6QNQ|1|14|A|2135
6QNQ|1|14|C|2136
*
6QNQ|1|14|G|2155
6QNQ|1|14|G|2156
6QNQ|1|14|G|2157
6QNQ|1|14|A|2158
6QNQ|1|14|G|2159
6QNQ|1|14|G|2160
6QNQ|1|14|C|2161

Current chains

Chain 14

23S ribosomal RNA

Nearby chains

Chain 13

Small subunit ribosomal RNA; SSU rRNA